It’s often the case that the first season of a television show involves a certain amount of workshopping to get the central concept polished and refined, before the series really hits its stride in a subsequent season. To an extent, this is true of The X-Files, which spent most of season 1 establishing the show’s status quo and then started really delivering on that concept’s promise in season 2- but at the same time, there’s a decent chunk at the start of the season where it looks like they might be rethinking the entire concept.
As of the start of season 2 of The X-Files, the X-Files division has been shut down, Agent Mulder’s stuck in a stultifying post listening to wiretap evidence, and Scully’s teaching trainees at Quantico how to unpack corpses. In the series opener, Little Green Men – another excellent episode from the star writing team of Glen Morgan and James Wong – Mulder isn’t even sure he believes in the old crusade any more, and ponders whether his memories of his sister’s abduction are really all they’re cracked up to be. Scully, for her part, seems to want to see where the chase takes them regardless of the reality or otherwise of Mulder’s memories – working on the basis that it doesn’t necessarily matter whether the inspiration for a project is rational or not if leads you to an interesting and illuminating end result.